The structure and physical properties of a packaged bacteriophage particle | Nature
nature.com · 6,540 words · saved by 1 readers
Multiresolution computational simulations generate all-atom models of a complete packaged virus particle.
Data availability CG packaging trajectories and select all-atom MD trajectories with water molecules removed have been deposited in the Illinois Data Bank under accession code IDB-4930709 (ref. 90). The following structures were used from the PDB: 3KDR, 2FT1 and 1OHG. Source data are provided with this paper. Code availability The files needed to setup CG packaging simulations and select all-atom MD simulations have been deposited, along with select analysis scripts, in the Illinois Data Bank under accession code IDB-4930709 (ref. 90). Remaining analysis scripts are available upon…
saved by
related reading
- Coronavirus envelope protein - Wikipediaen.wikipedia.org
- TGP, an extremely stable, non-aggregating fluorescent protein created by structure-guided surface engineeringpmc.ncbi.nlm.nih.gov
- Interesting Lab Websites | LoganThrasherCollins.comlogancollinsblog.com
- Multiscale Ensemble Modeling of Intrinsically Disordered Proteins: p53 N-Terminal Domain - PMCncbi.nlm.nih.gov
- Bacteriophage - Wikipediaen.wikipedia.org
- Fluid dynamics feels natural once you start with quantum mechanicsyoutube.com
- A primer on molecular dynamicsowlposting.com
- A primer on molecular dynamicsowlposting.com
- CG-dinucleotide suppression enables antiviral defense targeting non-self RNA - PMCncbi.nlm.nih.gov
- Supplementary Files for "Pattern recognition in the nucleation kinetics of non-equilibrium self-assembly"dna.caltech.edu
- diffuse.onediffuse.one
- Protein topology and stability define the space of allowed sequences - PMCpmc.ncbi.nlm.nih.gov