Uncovering de novo gene birth in yeast using deep transcriptomics
Genome-wide studies of de novo genes have tended to focus on genomic open reading frames (ORFs). Here, Blevins et al. use deep transcriptomics and synteny information to identify de novo transcripts in the yeast Saccharomyces cerevisiae, many of which are expressed from the alternative DNA strand.
Download PDF Subjects Evolvability Fungal genetics Molecular evolution Transcriptomics Abstract De novo gene origination has been recently established as an important mechanism for the formation of new genes. In organisms with a large genome, intergenic and intronic regions provide plenty of raw material for new transcriptional events to occur, but little is know about how de novo transcripts originate in more densely-packed genomes. Here, we identify 213 de novo originated transcripts in Saccharomyces cerevisiae using deep transcriptomics and genomic synteny information from multiple yeast sp
saved by
related reading
- Gene isoform - Wikipediaen.wikipedia.org
- cncRNAs: Bi-functional RNAs with protein coding and non-coding functions - PMCncbi.nlm.nih.gov
- We need new metaphors that put life at the centre of biologyaeon.co
- Leveraging supervised learning for functionally informed fine-mapping of cis-eQTLs identifies an additional 20,913 putative causal eQTLsnature.com
- Diversifying gene therapy vectors with machine learningsubstack.com
- Diversifying gene therapy vectors with machine learningsubstack.com
- What's different? Part one: Sequencingcenturyofbio.com
- Genome Duplication Is a Radical Evolutionary Gamble | Quanta Magazinequantamagazine.org
- A systematic CRISPR screen defines mutational mechanisms underpinning signatures caused by replication errors and endogenous DNA damagenature.com
- Mutational interactions define novel cancer subgroupsnature.com
- The big idea: can you inherit memories from your ancestors? | Genetics | The Guardiantheguardian.com
- Insights into non-crossover recombination from long-read sperm sequencing | bioRxivbiorxiv.org