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Welcome to oxDNA.org, a service of the Šulc lab at Arizona State University. Our goal is to facilitate development of more advanced and complex designs in the fields of DNA and RNA nanotechnology by facilitating non-experts to run simple simulations. This server uses oxDNA and oxRNA models to simulate DNA and RNA nanostructures to verify and prototype novel designs. The simulations this server supports are equilibrium sampling of assembled designs, meant to assist users to test in silico their designs before taking them to the lab. The server is provided for free for anyone. We ask you to be considerate to other users and keep the server usage reasonable. We also ask you to review FAQ below prior to submitting your first job. If you are looking for a tutorial to get started, check out the example page. OxDNA and oxRNA are coarse-grained models specifically developed to simulate nucleic acid nanotechnology. They are parametrized to reproduce basic structural, mechanical, and thermodynam

Dashboard - oxDNA.org Welcome to oxDNA.org! Services we provide Welcome to oxDNA.org, a service of the Šulc lab at Arizona State University. Our goal is to facilitate development of more advanced and complex designs in the fields of DNA and RNA nanotechnology by facilitating non-experts to run simple simulations. This server uses oxDNA and oxRNA models to simulate DNA and RNA nanostructures to verify and prototype novel designs. The simulations this server supports are equilibrium sampling of assembled designs, meant to assist users to test in silico their designs before taking them to the lab

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